For Capship Captains wondering about proper combat config of controls I have stumbled across (ooc; Thanks Koolmo) the way.
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Basicly, bind the #s (or key) you wish to use to activate weapons group. Then use alt + 1, alt + 2 and so on to designate weapons to these groups once in game, ie select (make green) in weapons HUD (bottom right) the group of weapons ya want and then hit alt + 1 for 1st group and so on. I have Infernos and secondary weapons 1, razors and secondary 2, secondary for anti-fighter 3, and CD 4.